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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937266.1_cds_XP_016482615.1_73823
CDS Infomation

[gene=LOC107803413] [db_xref=GeneID:107803413] [protein=laccase-2-like] [protein_id=XP_016482615.1] [location=complement(join(161247..161377,162024..162995,163088..163216,163306..163550,163842..163993,164077..164196))] [gbkey=CDS]
Sequence

ATGAGCGCTTCTATTTTTTCACCACAATCAATTTTACTTGCTATTTTCTGCATCACTTGT
AGCATTTTTTTATTTCCAGAGTTTGTCACTGCTGGTGTTACAAGGCATTACAAGTTCGAT
ATAAGATTGAAAAATGTGACTAGGCTATGCCAAACAAAGACAATTGTGACTGTGAATGGG
AAATTCCCAGGGCCTCGTGTTGTTGCTAGGGAAGGTGATCGTGTCGTGGTTAAGGTTGTT
AATCACGTCTCCAACAATGTTAGCTTCCATTGGCATGGAATTCGACAAATTCAAAGTGGA
TGGGCAGATGGACCAGCATATATCACCCAATGCCCGATACAAACTAGCCAAAGTTATGTC
TACAACTTCACCATTACTGGCCAAAGAGGAACTCTATGGTGGCATGCTCATATTTCATGG
ATGAGAGCTACACTTTATGGACCTCTTATCATTTATCCCCAGCATAATACTTCTTATCCA
TTTGCCAAACCCCACAAAGAAGTTCCCATCATTTTCGGTGAGTGGTGGAATGCTAATACC
GAGGCCGTGATTAATCAATCACTTGTAACTGGAGCTGGACCTAATGTCTCTGATTCATAC
ACTATTAATGGTCTTCCTGGACCATTATACAATTGTTCTGCGAAGGACACATTTAAGCTA
AAGGTAAAGCCTGGAAAGACATATATGCTTCGTATGATCAATGCTGCACTCAATGACGAC
CTTTTCTTCCGTATAGCTAATCATACAATGACAGTAGTGGAAGCCGATGCAGTTTATGTC
AAACCTTTTGAAACAGATACCATTCTCATTACACCTGGACAAACCACAAATGTCCTCCTT
AAAACACATCCTAATCCCCAACAGACAACTTTTTTTATGGCAGCTAGACCATATTTCACT
GGCCAGGGCACATTTGACAATTCCACAATTGCTGGAATTCTTATGTATGATAATGTATCT
GCAAGTATTAGCTCATCATCTAACACTTTGATTAAAAATCTTCCAATCCCAACTCTTCCT
CCAATTAATTCCACTTCATTTGTAGCCAATTTTACTAATAAGTTTCGATCTTTAGCTAAT
GCTCGATTTCCTGCTAACGTCCCCCAAAAAGTTGACAAACATTTTTTCTTTACCGTAGGT
CTTGGAAGTAACCCGTGCCCAAAAAACCAAACTTGTCAAGGTCCTAATAATTCCTCAAAA
TTTTCTGCTTCTGTTAATAATGTTTCTATGATTCTCCCTACCACAGCACTACTCCAATCC
TACTTCAAAAAATCAAATGGCGTATACACTACTGATTTTCCAAGTGTCCCTCTTGTGCCC
TTTAATTACACTGGCACTCCTCCAAATAATACTCATGTTTCTAATGGCACAAAAGTTGTG
GTACTTCCGTTCAATACTTCAGTGGAATTGGTAATGCAAGGCACTAGCATTTTAGGAGCT
GAAAGTCATCCTCTTCATCTTCATGGCTATAATTTCTATGTGGTTGGTCAAGGTTTTGGT
AATTTTGATCCTAAAAAAGACCCAGCTAATTACAATCTTGTTGATCCAGTTGAAAGAAAC
ACCATTGGAGTTCCATCTGGTGGTTGGGTAGCCATTCGTTTTCTAGCTGACAATCCAGGA
GTATGGTTTATGCATTGTCACTTTGAGGTGCATCTGAGTTGGGGTTTGAGGATGGCTTGG
CTGGTATTAGATGGAGAGCTTCCAAACCAAAAGTTGCCACCGCCGCCGGCTGATCTTCCC
AAGTGTTAA

Peptide Sequence

PEP ID

XP_016482615.1
PEP Infomation

PREDICTED: laccase-2-like [Nicotiana tabacum]
Sequence

MSASIFSPQSILLAIFCITCSIFLFPEFVTAGVTRHYKFDIRLKNVTRLCQTKTIVTVNG
KFPGPRVVAREGDRVVVKVVNHVSNNVSFHWHGIRQIQSGWADGPAYITQCPIQTSQSYV
YNFTITGQRGTLWWHAHISWMRATLYGPLIIYPQHNTSYPFAKPHKEVPIIFGEWWNANT
EAVINQSLVTGAGPNVSDSYTINGLPGPLYNCSAKDTFKLKVKPGKTYMLRMINAALNDD
LFFRIANHTMTVVEADAVYVKPFETDTILITPGQTTNVLLKTHPNPQQTTFFMAARPYFT
GQGTFDNSTIAGILMYDNVSASISSSSNTLIKNLPIPTLPPINSTSFVANFTNKFRSLAN
ARFPANVPQKVDKHFFFTVGLGSNPCPKNQTCQGPNNSSKFSASVNNVSMILPTTALLQS
YFKKSNGVYTTDFPSVPLVPFNYTGTPPNNTHVSNGTKVVVLPFNTSVELVMQGTSILGA
ESHPLHLHGYNFYVVGQGFGNFDPKKDPANYNLVDPVERNTIGVPSGGWVAIRFLADNPG
VWFMHCHFEVHLSWGLRMAWLVLDGELPNQKLPPPPADLPKC

Transcript Sequence

Gene sequence data has not been registered.